STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2VBK5_NAEGRHMG box family protein. (528 aa)    
Predicted Functional Partners:
D2VD65_NAEGR
Predicted protein.
    
 0.666
D2V5L9_NAEGR
Histone H2A; Belongs to the histone H2A family.
   
 0.655
D2V943_NAEGR
Actin related protein; Belongs to the actin family.
   
 0.628
D2UXP9_NAEGR
RuvB-like helicase; Belongs to the RuvB family.
    
 0.626
D2VYC1_NAEGR
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.602
D2UXG4_NAEGR
Predicted protein.
    
 0.592
D2VI91_NAEGR
Predicted protein.
    
 0.588
D2VK86_NAEGR
YL1_C domain-containing protein.
    
 0.564
D2V005_NAEGR
RNA polymerase II transcription factor TFIIH subunit.
    
 0.563
D2VP13_NAEGR
DNA repair helicase UVH6.
    
 0.541
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.