STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2VDG5_NAEGRPredicted protein. (382 aa)    
Predicted Functional Partners:
D2VYD0_NAEGR
Predicted protein.
   
 0.830
D2VFH0_NAEGR
Predicted protein.
   
 0.635
D2UXC8_NAEGR
Predicted protein.
   
 0.601
D2VFR1_NAEGR
Predicted protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.574
D2VTI3_NAEGR
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.552
D2VR35_NAEGR
Alpha-actinin.
   
 0.512
D2VSJ7_NAEGR
Ribosomal protein L30.
    
 0.508
D2UXU6_NAEGR
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.484
AM40
Uncharacterized protein AM40.
    
 0.464
D2V3B4_NAEGR
Nucleostemin family protein.
   
 0.463
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.