STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2VI97_NAEGRPredicted protein. (320 aa)    
Predicted Functional Partners:
D2VGQ5_NAEGR
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.855
D2VRL5_NAEGR
Predicted protein.
  
 0.855
D2W4C0_NAEGR
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.827
D2VIE3_NAEGR
COG1661 domain-containing protein.
  
  
 0.802
D2VRR8_NAEGR
Predicted protein.
  
 
 0.728
D2V0W2_NAEGR
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 
 0.719
D2V1S9_NAEGR
Lysine--tRNA ligase.
  
 
 0.700
D2V7Z1_NAEGR
Lysine--tRNA ligase.
  
 
 0.700
D2VEM9_NAEGR
Predicted protein.
  
 
 0.698
D2V1E8_NAEGR
Dihydrolipoamide succinyltransferase.
   
 0.687
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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