STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2VP04_NAEGRPolyubiquitin. (152 aa)    
Predicted Functional Partners:
D2VPA9_NAEGR
Vacuolar sorting protein 9 domain-containing protein.
    
 0.871
D2VCK7_NAEGR
PB1 domain-containing protein.
   
 0.857
D2VS84_NAEGR
Predicted protein.
   
 0.857
D2V243_NAEGR
HECTc domain-containing protein.
   
 0.826
D2V7D1_NAEGR
Predicted protein.
   
 0.826
D2VIC1_NAEGR
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.777
D2V7Z8_NAEGR
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.775
D2VC39_NAEGR
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.765
D2VD54_NAEGR
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.757
D2VIK1_NAEGR
Predicted protein.
   
 0.756
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.