STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2VPA5_NAEGRPredicted protein. (341 aa)    
Predicted Functional Partners:
D2VBR5_NAEGR
Predicted protein.
  
  
 
0.908
D2VK35_NAEGR
WD-40 repeat-containing protein.
    
 
 0.884
D2V470_NAEGR
Ubiquitin-protein ligase.
    
 
 0.883
D2UZ40_NAEGR
NPL4 family protein.
    
 
 0.871
D2V218_NAEGR
Ubiquitin fusion degradation protein domain-containing protein.
   
 
 0.846
D2VAL5_NAEGR
Ubiquitin fusion-degradation protein.
   
 
 0.846
FM139
Uncharacterized protein FM139.
   
 
 0.821
D2VUM8_NAEGR
Predicted protein.
   
 
 0.821
D2V4E1_NAEGR
Polyubiquitin.
   
 
 0.772
D2VU93_NAEGR
Predicted protein.
   
 
 0.772
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.