STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2W2Y1_NAEGRPredicted protein. (437 aa)    
Predicted Functional Partners:
D2VT50_NAEGR
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.988
D2VNF2_NAEGR
Predicted protein.
     
 0.928
D2W3M5_NAEGR
Predicted protein.
     
 0.889
D2VZ30_NAEGR
Predicted protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
 0.883
D2V9U8_NAEGR
Predicted protein.
     
 0.840
D2VE28_NAEGR
Charged multivesicular body protein 2a.
    
 0.764
D2W1E8_NAEGR
Predicted protein.
    
 0.764
D2VK24_NAEGR
Predicted protein.
     
 0.754
D2VWV9_NAEGR
Predicted protein.
     
 0.754
AM22
Uncharacterized protein AM22.
     
 0.731
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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