STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2W538_NAEGRPredicted protein. (328 aa)    
Predicted Functional Partners:
D2VNF3_NAEGR
Spindle pole body component.
   
 0.537
D2UY41_NAEGR
Spindle pole body component.
    
 0.503
NAEGRDRAFT_434
Spindle pole body component.
    
 0.503
D2VCA4_NAEGR
Predicted protein.
  
     0.474
D2UYJ2_NAEGR
Spindle pole body component.
    
 0.469
D2VDZ3_NAEGR
Spindle pole body component.
    
 0.465
D2VBC7_NAEGR
Predicted protein.
   
 0.410
D2VKI6_NAEGR
Predicted protein.
  
     0.400
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.