STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2W5W3_NAEGRRab family small GTPase. (197 aa)    
Predicted Functional Partners:
D2V817_NAEGR
Predicted protein.
    
 0.777
D2VEP4_NAEGR
Predicted protein.
     
 0.756
D2VP30_NAEGR
Rab family small GTPase.
  
 
 0.694
D2VP41_NAEGR
Rab family member.
  
 
 0.673
D2V193_NAEGR
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.663
D2VFY3_NAEGR
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.663
D2VC14_NAEGR
Predicted protein.
   
 
  0.593
D2VIP0_NAEGR
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.589
D2VPJ7_NAEGR
Predicted protein.
     
 0.588
D2V7V2_NAEGR
Alpha subunit of protein prenyltransferase.
    
 0.559
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.