STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD72809.1Outer membrane transport energization protein ExbB. (475 aa)    
Predicted Functional Partners:
SDD72925.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.992
SDD72891.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 
 0.981
SDD78325.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.971
SDD72764.1
Protein of unknown function.
 
  
 0.958
SDD72967.1
TPR repeat-containing protein.
 
   
 0.946
SDE17926.1
Type IV pilus assembly protein PilQ; Belongs to the bacterial secretin family.
 
 
 0.936
SDD78292.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 
 0.923
SDE14526.1
Biopolymer transport protein ExbD.
 
 
 0.919
SDE26251.1
Protein TonB.
  
 
 0.900
SDE40301.1
Cell division and transport-associated protein TolA.
  
 
 0.900
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.