STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD74057.1Two-component system, OmpR family, sensor histidine kinase CpxA. (454 aa)    
Predicted Functional Partners:
SDD73698.1
PAS domain S-box-containing protein.
 0.990
SDD74091.1
Two component transcriptional regulator, winged helix family.
 0.985
SDD91254.1
Signal transduction histidine kinase.
0.975
SDE70762.1
PAS domain S-box-containing protein.
 
0.973
SDE13166.1
Signal transduction histidine kinase.
 
 
0.965
SDE13873.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
 0.962
SDD77389.1
Signal transduction histidine kinase.
 
0.948
SDE43412.1
PAS domain S-box-containing protein.
 
 
 0.944
SDE43530.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.941
SDE63838.1
Signal transduction histidine kinase.
 
0.940
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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