STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD74127.1Two-component system, OmpR family, response regulator RstA. (248 aa)    
Predicted Functional Partners:
SDE13166.1
Signal transduction histidine kinase.
  
 0.994
SDD91254.1
Signal transduction histidine kinase.
  
 0.980
SDE43412.1
PAS domain S-box-containing protein.
  
 0.977
SDD74057.1
Two-component system, OmpR family, sensor histidine kinase CpxA.
 
 0.922
SDD77389.1
Signal transduction histidine kinase.
 
 0.906
SDE12967.1
PAS domain S-box-containing protein.
  
 0.893
SDE63838.1
Signal transduction histidine kinase.
  
 0.884
SDE34115.1
PAS domain S-box-containing protein.
 
 
 0.883
SDE33139.1
Polar amino acid transport system substrate-binding protein.
  
 0.876
SDD73698.1
PAS domain S-box-containing protein.
 
 0.874
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.