STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD75937.1Seven times multi-haem cytochrome CxxCH. (506 aa)    
Predicted Functional Partners:
SDE42140.1
Cytochrome c552; Belongs to the cytochrome c-552 family.
  
 0.950
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.902
SDE46851.1
Hypothetical protein.
 
 0.735
SDD73050.1
Hypothetical protein.
  
 0.690
SDD91254.1
Signal transduction histidine kinase.
    
 
 0.613
SDD73450.1
Fe-S-cluster-containing dehydrogenase component.
 
 
 0.572
SDE33904.1
Cytochrome bd-type quinol oxidase, subunit 1.
   
 
 0.541
SDE58095.1
4Fe-4S binding domain-containing protein.
 
 
 0.515
SDE07197.1
Cobalt/nickel transport protein.
  
     0.481
SDD97890.1
Alginate export.
  
   0.470
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.