STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD69455.1Catalase; Belongs to the catalase family. (484 aa)    
Predicted Functional Partners:
SDE57562.1
Glycolate oxidase.
   
 0.920
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
    
 
 0.910
SDE16480.1
Acetolactate synthase, large subunit.
   
 0.905
SDD96470.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
 
 0.894
SDE09248.1
methionine-R-sulfoxide reductase.
   
 
 0.886
SDD98252.1
Thioredoxin reductase (NADPH).
   
 
 0.814
fur-2
Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.
    
 0.774
SDE22482.1
Acyl-CoA dehydrogenase.
  
 0.769
SDD76034.1
Serine protease Do; Belongs to the peptidase S1C family.
   
 0.706
SDE70577.1
TLP18.3, Psb32 and MOLO-1 founding protein of phosphatase.
   
 0.706
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.