STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD81808.1Putative zinc-or iron-chelating domain-containing protein. (215 aa)    
Predicted Functional Partners:
SDD81757.1
Uncharacterized protein.
       0.519
SDD81782.1
LemA protein.
       0.519
SDD81735.1
Putative membrane protein.
       0.503
SDE63887.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.447
SDD74194.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
   0.446
SDE27284.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
   0.446
SDE52204.1
Hypothetical protein.
  
     0.430
SDE34072.1
NAD+---dinitrogen-reductase ADP-D-ribosyltransferase.
  
     0.425
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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