Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD74194.1 | SDD81808.1 | SAMN05661003_101167 | SAMN05661003_101406 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.446 |
SDD81735.1 | SDD81757.1 | SAMN05661003_101403 | SAMN05661003_101404 | Putative membrane protein. | Uncharacterized protein. | 0.949 |
SDD81735.1 | SDD81782.1 | SAMN05661003_101403 | SAMN05661003_101405 | Putative membrane protein. | LemA protein. | 0.925 |
SDD81735.1 | SDD81808.1 | SAMN05661003_101403 | SAMN05661003_101406 | Putative membrane protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.503 |
SDD81757.1 | SDD81735.1 | SAMN05661003_101404 | SAMN05661003_101403 | Uncharacterized protein. | Putative membrane protein. | 0.949 |
SDD81757.1 | SDD81782.1 | SAMN05661003_101404 | SAMN05661003_101405 | Uncharacterized protein. | LemA protein. | 0.962 |
SDD81757.1 | SDD81808.1 | SAMN05661003_101404 | SAMN05661003_101406 | Uncharacterized protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.519 |
SDD81782.1 | SDD81735.1 | SAMN05661003_101405 | SAMN05661003_101403 | LemA protein. | Putative membrane protein. | 0.925 |
SDD81782.1 | SDD81757.1 | SAMN05661003_101405 | SAMN05661003_101404 | LemA protein. | Uncharacterized protein. | 0.962 |
SDD81782.1 | SDD81808.1 | SAMN05661003_101405 | SAMN05661003_101406 | LemA protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.519 |
SDD81808.1 | SDD74194.1 | SAMN05661003_101406 | SAMN05661003_101167 | Putative zinc-or iron-chelating domain-containing protein. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.446 |
SDD81808.1 | SDD81735.1 | SAMN05661003_101406 | SAMN05661003_101403 | Putative zinc-or iron-chelating domain-containing protein. | Putative membrane protein. | 0.503 |
SDD81808.1 | SDD81757.1 | SAMN05661003_101406 | SAMN05661003_101404 | Putative zinc-or iron-chelating domain-containing protein. | Uncharacterized protein. | 0.519 |
SDD81808.1 | SDD81782.1 | SAMN05661003_101406 | SAMN05661003_101405 | Putative zinc-or iron-chelating domain-containing protein. | LemA protein. | 0.519 |
SDD81808.1 | SDE27284.1 | SAMN05661003_101406 | SAMN05661003_10674 | Putative zinc-or iron-chelating domain-containing protein. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.446 |
SDD81808.1 | SDE34072.1 | SAMN05661003_101406 | SAMN05661003_10864 | Putative zinc-or iron-chelating domain-containing protein. | NAD+---dinitrogen-reductase ADP-D-ribosyltransferase. | 0.425 |
SDD81808.1 | SDE52204.1 | SAMN05661003_101406 | SAMN05661003_11437 | Putative zinc-or iron-chelating domain-containing protein. | Hypothetical protein. | 0.430 |
SDD81808.1 | SDE63887.1 | SAMN05661003_101406 | SAMN05661003_12113 | Putative zinc-or iron-chelating domain-containing protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.447 |
SDE27284.1 | SDD81808.1 | SAMN05661003_10674 | SAMN05661003_101406 | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.446 |
SDE34072.1 | SDD81808.1 | SAMN05661003_10864 | SAMN05661003_101406 | NAD+---dinitrogen-reductase ADP-D-ribosyltransferase. | Putative zinc-or iron-chelating domain-containing protein. | 0.425 |
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