STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD82636.1HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). (403 aa)    
Predicted Functional Partners:
SDD82710.1
Adenylate cyclase.
 
 0.995
SDD81260.1
Diguanylate cyclase with GAF sensor.
 
0.976
SDD91216.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.971
SDE13166.1
Signal transduction histidine kinase.
   
 0.964
SDE43412.1
PAS domain S-box-containing protein.
 
 
 0.964
SDD73698.1
PAS domain S-box-containing protein.
 
 0.961
SDD91254.1
Signal transduction histidine kinase.
  
 0.961
SDE70762.1
PAS domain S-box-containing protein.
 
 0.959
SDD94706.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.956
SDE34115.1
PAS domain S-box-containing protein.
  
 0.955
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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