Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD89568.1 | SDD94295.1 | SAMN05661003_10245 | SAMN05661003_102186 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.770 |
SDD89568.1 | acpS | SAMN05661003_10245 | SAMN05661003_102183 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. | 0.458 |
SDD89568.1 | glmM | SAMN05661003_10245 | SAMN05661003_102181 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.417 |
SDD94101.1 | SDD94270.1 | SAMN05661003_102180 | SAMN05661003_102185 | YbbR-like protein. | CBS domain-containing protein. | 0.795 |
SDD94101.1 | SDD94295.1 | SAMN05661003_102180 | SAMN05661003_102186 | YbbR-like protein. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.800 |
SDD94101.1 | SDD94328.1 | SAMN05661003_102180 | SAMN05661003_102187 | YbbR-like protein. | Aspartate kinase; Belongs to the aspartokinase family. | 0.551 |
SDD94101.1 | acpS | SAMN05661003_102180 | SAMN05661003_102183 | YbbR-like protein. | Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. | 0.800 |
SDD94101.1 | glmM | SAMN05661003_102180 | SAMN05661003_102181 | YbbR-like protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.848 |
SDD94101.1 | nnrD | SAMN05661003_102180 | SAMN05661003_102184 | YbbR-like protein. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.815 |
SDD94101.1 | pdxJ | SAMN05661003_102180 | SAMN05661003_102182 | YbbR-like protein. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.807 |
SDD94270.1 | SDD94101.1 | SAMN05661003_102185 | SAMN05661003_102180 | CBS domain-containing protein. | YbbR-like protein. | 0.795 |
SDD94270.1 | SDD94295.1 | SAMN05661003_102185 | SAMN05661003_102186 | CBS domain-containing protein. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.811 |
SDD94270.1 | SDD94328.1 | SAMN05661003_102185 | SAMN05661003_102187 | CBS domain-containing protein. | Aspartate kinase; Belongs to the aspartokinase family. | 0.590 |
SDD94270.1 | acpS | SAMN05661003_102185 | SAMN05661003_102183 | CBS domain-containing protein. | Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. | 0.809 |
SDD94270.1 | glmM | SAMN05661003_102185 | SAMN05661003_102181 | CBS domain-containing protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.809 |
SDD94270.1 | nnrD | SAMN05661003_102185 | SAMN05661003_102184 | CBS domain-containing protein. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.812 |
SDD94270.1 | pdxJ | SAMN05661003_102185 | SAMN05661003_102182 | CBS domain-containing protein. | Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.809 |
SDD94295.1 | SDD89568.1 | SAMN05661003_102186 | SAMN05661003_10245 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.770 |
SDD94295.1 | SDD94101.1 | SAMN05661003_102186 | SAMN05661003_102180 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | YbbR-like protein. | 0.800 |
SDD94295.1 | SDD94270.1 | SAMN05661003_102186 | SAMN05661003_102185 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | CBS domain-containing protein. | 0.811 |
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