STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD95039.1ABC-type Fe3+ transport system, substrate-binding protein. (407 aa)    
Predicted Functional Partners:
SDD95098.1
ABC-type lipoprotein export system, ATPase component.
 
 
  0.961
SDD95072.1
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase.
 
     0.942
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 
 0.755
SDD95137.1
Hypothetical protein.
       0.689
SDD95168.1
Nitrous oxide-stimulated promoter.
       0.678
SDE27136.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.613
SDD73698.1
PAS domain S-box-containing protein.
    
 0.610
SDE70762.1
PAS domain S-box-containing protein.
    
 0.568
SDE46851.1
Hypothetical protein.
  
     0.520
SDE46912.1
Short chain amide porin.
 
     0.515
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.