Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDE04398.1 | SDE04429.1 | SAMN05661003_10366 | SAMN05661003_10367 | Uncharacterized membrane protein YckC, RDD family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.795 |
| SDE04398.1 | SDE04458.1 | SAMN05661003_10366 | SAMN05661003_10368 | Uncharacterized membrane protein YckC, RDD family. | Hypothetical protein. | 0.651 |
| SDE04398.1 | argB | SAMN05661003_10366 | SAMN05661003_10370 | Uncharacterized membrane protein YckC, RDD family. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.673 |
| SDE04398.1 | argD | SAMN05661003_10366 | SAMN05661003_10369 | Uncharacterized membrane protein YckC, RDD family. | Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.675 |
| SDE04398.1 | argG | SAMN05661003_10366 | SAMN05661003_10365 | Uncharacterized membrane protein YckC, RDD family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.601 |
| SDE04398.1 | hslU | SAMN05661003_10366 | SAMN05661003_10371 | Uncharacterized membrane protein YckC, RDD family. | ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.574 |
| SDE04398.1 | hslV | SAMN05661003_10366 | SAMN05661003_10372 | Uncharacterized membrane protein YckC, RDD family. | ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.573 |
| SDE04429.1 | SDE04398.1 | SAMN05661003_10367 | SAMN05661003_10366 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Uncharacterized membrane protein YckC, RDD family. | 0.795 |
| SDE04429.1 | SDE04458.1 | SAMN05661003_10367 | SAMN05661003_10368 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Hypothetical protein. | 0.651 |
| SDE04429.1 | SDE04634.1 | SAMN05661003_10367 | SAMN05661003_10374 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.435 |
| SDE04429.1 | alaS | SAMN05661003_10367 | SAMN05661003_10373 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.414 |
| SDE04429.1 | argB | SAMN05661003_10367 | SAMN05661003_10370 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.989 |
| SDE04429.1 | argD | SAMN05661003_10367 | SAMN05661003_10369 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.996 |
| SDE04429.1 | argG | SAMN05661003_10367 | SAMN05661003_10365 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.998 |
| SDE04429.1 | hslU | SAMN05661003_10367 | SAMN05661003_10371 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.669 |
| SDE04429.1 | hslV | SAMN05661003_10367 | SAMN05661003_10372 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.621 |
| SDE04458.1 | SDE04398.1 | SAMN05661003_10368 | SAMN05661003_10366 | Hypothetical protein. | Uncharacterized membrane protein YckC, RDD family. | 0.651 |
| SDE04458.1 | SDE04429.1 | SAMN05661003_10368 | SAMN05661003_10367 | Hypothetical protein. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.651 |
| SDE04458.1 | SDE04634.1 | SAMN05661003_10368 | SAMN05661003_10374 | Hypothetical protein. | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.404 |
| SDE04458.1 | SDE04668.1 | SAMN05661003_10368 | SAMN05661003_10375 | Hypothetical protein. | Twitching motility protein PilT. | 0.404 |
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