STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE04840.1Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (718 aa)    
Predicted Functional Partners:
SDE04868.1
Ferrous iron transport protein A.
 
  
 0.982
SDE07117.1
Ferrous iron transport protein A.
 
  
 0.875
SDD82323.1
Ferrous iron transport protein A.
  
  
 0.687
SDE04892.1
Hypothetical protein.
   
   0.551
SDE04810.1
4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.489
SDE02332.1
Glutamate synthase (ferredoxin).
  
   
 0.446
SDD80031.1
Glutamate synthase (NADPH) GltB3 subunit.
  
   
 0.441
SDE06906.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.409
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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