STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE21097.1Phage terminase-like protein, large subunit, contains N-terminal HTH domain. (566 aa)    
Predicted Functional Partners:
SDE21121.1
Phage terminase, small subunit, putative, P27 family.
 
    0.963
SDE21080.1
Phage portal protein, HK97 family.
 
   
 0.962
SDE21144.1
DNA methylase.
 
     0.954
SDE21044.1
Phage major capsid protein, HK97 family.
 
     0.949
SDE21065.1
Hypothetical protein.
 
     0.943
SDE21164.1
ParB-like nuclease domain-containing protein.
 
     0.903
SDE20978.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
     0.853
SDE20838.1
Phage tail tape measure protein, TP901 family, core region.
 
     0.786
SDE21330.1
Hypothetical protein.
 
     0.720
SDE21186.1
HNH endonuclease.
  
  
 0.658
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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