STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE21508.1Hypothetical protein. (226 aa)    
Predicted Functional Partners:
SDE21608.1
Hypothetical protein.
 
     0.939
SDE21535.1
AAA domain-containing protein.
 
     0.933
SDE21428.1
Helicase conserved C-terminal domain-containing protein.
 
     0.904
SDE21330.1
Hypothetical protein.
 
     0.807
SDE21583.1
ParB/RepB/Spo0J family partition protein.
 
     0.791
SDE21164.1
ParB-like nuclease domain-containing protein.
 
     0.779
SDE21144.1
DNA methylase.
 
     0.777
SDE21253.1
AAA domain-containing protein.
 
     0.766
SDE21561.1
Hypothetical protein.
       0.741
SDE21080.1
Phage portal protein, HK97 family.
  
     0.716
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.