Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD94295.1 | SDE16576.1 | SAMN05661003_102186 | SAMN05661003_104142 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.994 |
SDD94295.1 | tsaD | SAMN05661003_102186 | SAMN05661003_10576 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.961 |
SDE16576.1 | SDD94295.1 | SAMN05661003_104142 | SAMN05661003_102186 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.994 |
SDE16576.1 | SDE33841.1 | SAMN05661003_104142 | SAMN05661003_10857 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | Translation factor SUA5; Belongs to the SUA5 family. | 0.468 |
SDE16576.1 | tsaD | SAMN05661003_104142 | SAMN05661003_10576 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.966 |
SDE22352.1 | SDE22409.1 | SAMN05661003_10575 | SAMN05661003_10577 | Hypothetical protein. | PhoH-like ATPase. | 0.655 |
SDE22352.1 | SDE22424.1 | SAMN05661003_10575 | SAMN05661003_10578 | Hypothetical protein. | Cysteine desulfurase family protein. | 0.542 |
SDE22352.1 | rsmA | SAMN05661003_10575 | SAMN05661003_10574 | Hypothetical protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.807 |
SDE22352.1 | tsaD | SAMN05661003_10575 | SAMN05661003_10576 | Hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.765 |
SDE22409.1 | SDE22352.1 | SAMN05661003_10577 | SAMN05661003_10575 | PhoH-like ATPase. | Hypothetical protein. | 0.655 |
SDE22409.1 | SDE22424.1 | SAMN05661003_10577 | SAMN05661003_10578 | PhoH-like ATPase. | Cysteine desulfurase family protein. | 0.706 |
SDE22409.1 | rsmA | SAMN05661003_10577 | SAMN05661003_10574 | PhoH-like ATPase. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.685 |
SDE22409.1 | tsaD | SAMN05661003_10577 | SAMN05661003_10576 | PhoH-like ATPase. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.724 |
SDE22424.1 | SDE22352.1 | SAMN05661003_10578 | SAMN05661003_10575 | Cysteine desulfurase family protein. | Hypothetical protein. | 0.542 |
SDE22424.1 | SDE22409.1 | SAMN05661003_10578 | SAMN05661003_10577 | Cysteine desulfurase family protein. | PhoH-like ATPase. | 0.706 |
SDE22424.1 | rsmA | SAMN05661003_10578 | SAMN05661003_10574 | Cysteine desulfurase family protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.619 |
SDE22424.1 | tsaD | SAMN05661003_10578 | SAMN05661003_10576 | Cysteine desulfurase family protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.641 |
SDE33841.1 | SDE16576.1 | SAMN05661003_10857 | SAMN05661003_104142 | Translation factor SUA5; Belongs to the SUA5 family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.468 |
SDE33841.1 | rsmA | SAMN05661003_10857 | SAMN05661003_10574 | Translation factor SUA5; Belongs to the SUA5 family. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.538 |
SDE33841.1 | tsaD | SAMN05661003_10857 | SAMN05661003_10576 | Translation factor SUA5; Belongs to the SUA5 family. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.724 |
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