STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE22804.1Diguanylate cyclase (GGDEF) domain-containing protein. (622 aa)    
Predicted Functional Partners:
SDE25888.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.995
SDD91254.1
Signal transduction histidine kinase.
  
 
 0.994
SDE43530.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.994
SDE63838.1
Signal transduction histidine kinase.
  
 0.992
SDE13873.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
  
 
 0.990
SDE13166.1
Signal transduction histidine kinase.
  
 0.987
SDE33139.1
Polar amino acid transport system substrate-binding protein.
 
 0.987
SDD97919.1
Diguanylate cyclase (GGDEF) domain-containing protein.
0.980
SDE43412.1
PAS domain S-box-containing protein.
  
 0.980
SDE57265.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.979
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
Server load: low (18%) [HD]