STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE22881.1Hypothetical protein. (462 aa)    
Predicted Functional Partners:
SDE08639.1
DNA translocase FtsK.
    
 
 0.764
SDE22854.1
LPP20 lipoprotein.
       0.703
SDE22905.1
Hypothetical protein.
       0.626
SDE20978.1
Phage conserved hypothetical protein, phiE125 gp8 family.
  
 0.620
SDE22830.1
Hypothetical protein.
       0.609
SDE04085.1
Lysophospholipase L1.
    
  0.597
SDD72566.1
Outer membrane receptor for ferrienterochelin and colicins.
    
 
 0.592
SDD72641.1
Hemoglobin/transferrin/lactoferrin receptor protein.
    
 
 0.592
SDE60539.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
   
 
 0.539
SDE30786.1
Protein of unknown function.
  
 0.471
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.