STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE26326.1MJ0042 family finger-like domain-containing protein. (395 aa)    
Predicted Functional Partners:
SDE13873.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
   
 
  0.926
SDE26355.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.800
SDE13166.1
Signal transduction histidine kinase.
  
 
  0.752
SDD76979.1
Putative exonuclease, RdgC.
  
     0.750
SDD91254.1
Signal transduction histidine kinase.
   
 
  0.722
SDD79455.1
Hypothetical protein.
 
  
  0.689
SDE63838.1
Signal transduction histidine kinase.
   
 
  0.684
SDE06117.1
Metal dependent phosphohydrolase.
  
     0.644
SDE54745.1
Zinc dependent phospholipase C.
  
     0.626
SDD73387.1
Hypothetical protein.
  
     0.624
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.