STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE27946.1Chemotaxis protein CheX. (155 aa)    
Predicted Functional Partners:
SDE13166.1
Signal transduction histidine kinase.
   
 0.923
SDD91254.1
Signal transduction histidine kinase.
   
 0.890
SDD73698.1
PAS domain S-box-containing protein.
 
 0.866
SDE43412.1
PAS domain S-box-containing protein.
   
 0.863
SDE27977.1
Hypothetical protein.
  
 
 0.831
SDE62840.1
Two-component system, chemotaxis family, response regulator CheV.
 
 
 0.828
SDE43530.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.812
SDE27912.1
Chemotaxis protein CheX.
 
  
 
0.792
SDE27879.1
Response regulator receiver protein.
 
  
  0.777
SDE13873.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
  
 0.720
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.