STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE30629.1Membrane fusion protein, epimerase transport system. (479 aa)    
Predicted Functional Partners:
SDE66787.1
ABC-type multidrug transport system, ATPase and permease component.
 
 0.976
SDE30664.1
Outer membrane protein TolC.
 
 0.973
SDE30599.1
ATP-binding cassette, subfamily C, EexD.
  
 0.949
SDD73932.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
 0.822
SDD71172.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
 0.822
SDE47780.1
Outer membrane protein, multidrug efflux system.
  
 0.822
SDE09581.1
Outer membrane protein TolC.
  
 0.795
SDE30695.1
Ca2+-binding protein, RTX toxin-related.
 
  
 0.691
SDD71059.1
Putative ABC transport system permease protein.
  
  
 0.613
SDE09653.1
Putative ABC transport system permease protein.
  
  
 0.613
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.