STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE32471.1Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (312 aa)    
Predicted Functional Partners:
SDE32502.1
Putative ABC transport system ATP-binding protein.
    0.996
SDE32304.1
Putative ABC transport system substrate-binding protein.
    0.986
SDE32636.1
ABC-type uncharacterized transport system, substrate-binding protein.
    0.921
SDE13134.1
Putative ABC transport system substrate-binding protein.
 
    0.908
SDE32436.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
     0.904
SDE32402.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
       0.639
SDE32377.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
     0.587
SDE22409.1
PhoH-like ATPase.
   
    0.424
SDE29430.1
Magnesium and cobalt transporter.
   
    0.424
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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