STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE44430.1AAA domain-containing protein. (745 aa)    
Predicted Functional Partners:
SDE44406.1
Hypothetical protein.
 
   0.940
SDE59880.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.867
SDE44379.1
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase.
       0.807
SDE44454.1
Histidine triad (HIT) family protein.
       0.790
SDE56428.1
Type I restriction enzyme, S subunit.
  
    0.706
SDE59959.1
Type I restriction modification DNA specificity domain-containing protein.
  
    0.706
SDE63224.1
Type I restriction modification DNA specificity domain-containing protein.
  
    0.706
SDE44481.1
Hypothetical protein.
       0.697
SDE44510.1
Polysaccharide deacetylase.
       0.697
SDD82014.1
General secretion pathway protein L.
  
     0.666
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.