STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE46851.1Hypothetical protein. (417 aa)    
Predicted Functional Partners:
SDE46884.1
Hypothetical protein.
 
 0.986
SDE46729.1
Cytochrome c.
    
 0.894
SDE46822.1
Rieske [2Fe-2S] domain-containing protein.
 
    0.889
SDE46912.1
Short chain amide porin.
 
     0.868
SDE46790.1
Cytochrome b(N-terminal)/b6/petB.
 
     0.820
SDD79377.1
Doubled CXXCH motif (Paired_CXXCH_1).
 
 0.817
SDE46760.1
Hypothetical protein.
       0.745
SDE46697.1
Hypothetical protein.
       0.737
SDD75937.1
Seven times multi-haem cytochrome CxxCH.
 
 0.735
SDE46956.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
 
     0.650
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.