STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE55767.1Type III restriction enzyme. (1045 aa)    
Predicted Functional Partners:
SDE55838.1
Adenine-specific DNA-methyltransferase.
  
 0.980
SDE55862.1
Protein of unknown function.
 
     0.953
SDE55883.1
Superfamily II DNA or RNA helicase, SNF2 family.
 
     0.953
SDE55816.1
Predicted ATPase.
  
    0.801
SDE55791.1
Protein of unknown function.
       0.794
SDE21144.1
DNA methylase.
     
 0.471
SDE21164.1
ParB-like nuclease domain-containing protein.
     
 0.471
SDE55723.1
Hypothetical protein.
       0.468
SDE55747.1
Hypothetical protein.
       0.468
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.