STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE62898.1TRAP-type C4-dicarboxylate transport system, substrate-binding protein. (344 aa)    
Predicted Functional Partners:
SDE62926.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.994
SDE62957.1
C4-dicarboxylate transporter, DctM subunit.
 
 
 0.991
SDE62870.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
  
 
0.941
SDE36818.1
TRAP transporter T-component.
 
 
 
 0.829
SDE36899.1
TRAP transporter, DctM subunit.
 
  
 0.825
SDE36872.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  
 0.797
SDE62980.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.675
SDE08751.1
TRAP transporter, 4TM/12TM fusion protein.
  
     0.486
Your Current Organism:
Desulfuromonas thiophila
NCBI taxonomy Id: 57664
Other names: D. thiophila, DSM 8987, strain NZ27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.