STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB30645.1Signal transduction histidine kinase. (416 aa)    
Predicted Functional Partners:
SEB30655.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.974
SEB64458.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.890
SEC49837.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain; Manually curated.
 
 0.869
SED39769.1
Two component transcriptional regulator, winged helix family.
 
 0.866
SED24149.1
Two component transcriptional regulator, winged helix family.
 
 0.865
SEB97018.1
Two-component system, OmpR family, response regulator MprA.
 
 0.863
SEB83103.1
Two component transcriptional regulator, winged helix family.
 
 0.860
SEB64650.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.845
SED25010.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.845
SEB30634.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
 
 0.841
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.