STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB31199.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
SEB31207.1
Hypothetical protein.
       0.783
SEB31216.1
Uncharacterized conserved protein, DUF2236 family.
       0.778
SEB31192.1
Hypothetical protein.
       0.729
SEB31118.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
       0.672
SEB31127.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
       0.672
SEB31137.1
MlaD protein.
       0.672
SEB31147.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
       0.672
SEB31154.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
       0.672
SEB31163.1
Virulence factor Mce family protein.
       0.672
SEB31173.1
Virulence factor Mce family protein.
       0.672
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.