Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB31568.1 | SEB31579.1 | SAMN04489793_0237 | SAMN04489793_0238 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.557 |
SEB31568.1 | SEB31589.1 | SAMN04489793_0237 | SAMN04489793_0239 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.426 |
SEB31579.1 | SEB31568.1 | SAMN04489793_0238 | SAMN04489793_0237 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.557 |
SEB31579.1 | SEB31589.1 | SAMN04489793_0238 | SAMN04489793_0239 | DNA-binding transcriptional regulator, MarR family. | Predicted arabinose efflux permease, MFS family. | 0.667 |
SEB31579.1 | SEB31597.1 | SAMN04489793_0238 | SAMN04489793_0240 | DNA-binding transcriptional regulator, MarR family. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.451 |
SEB31589.1 | SEB31568.1 | SAMN04489793_0239 | SAMN04489793_0237 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.426 |
SEB31589.1 | SEB31579.1 | SAMN04489793_0239 | SAMN04489793_0238 | Predicted arabinose efflux permease, MFS family. | DNA-binding transcriptional regulator, MarR family. | 0.667 |
SEB31589.1 | SEB31597.1 | SAMN04489793_0239 | SAMN04489793_0240 | Predicted arabinose efflux permease, MFS family. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.604 |
SEB31589.1 | SEB78414.1 | SAMN04489793_0239 | SAMN04489793_0789 | Predicted arabinose efflux permease, MFS family. | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.523 |
SEB31589.1 | SEC08835.1 | SAMN04489793_0239 | SAMN04489793_1497 | Predicted arabinose efflux permease, MFS family. | Starch phosphorylase. | 0.482 |
SEB31589.1 | SEC26955.1 | SAMN04489793_0239 | SAMN04489793_1938 | Predicted arabinose efflux permease, MFS family. | Rifampin ADP-ribosylating transferase. | 0.657 |
SEB31597.1 | SEB31579.1 | SAMN04489793_0240 | SAMN04489793_0238 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | DNA-binding transcriptional regulator, MarR family. | 0.451 |
SEB31597.1 | SEB31589.1 | SAMN04489793_0240 | SAMN04489793_0239 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Predicted arabinose efflux permease, MFS family. | 0.604 |
SEB78414.1 | SEB31589.1 | SAMN04489793_0789 | SAMN04489793_0239 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Predicted arabinose efflux permease, MFS family. | 0.523 |
SEC08835.1 | SEB31589.1 | SAMN04489793_1497 | SAMN04489793_0239 | Starch phosphorylase. | Predicted arabinose efflux permease, MFS family. | 0.482 |
SEC26955.1 | SEB31589.1 | SAMN04489793_1938 | SAMN04489793_0239 | Rifampin ADP-ribosylating transferase. | Predicted arabinose efflux permease, MFS family. | 0.657 |