STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB67346.1UDP-MurNAc hydroxylase. (529 aa)    
Predicted Functional Partners:
SEB67315.1
Hypothetical protein.
       0.789
SEC35697.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.766
SEB83836.1
Uroporphyrinogen III methyltransferase / synthase.
  
  
 0.740
SEB67420.1
Hypothetical protein.
     
 0.729
SEB64147.1
Hypothetical protein.
  
     0.700
SEB67385.1
1-acyl-sn-glycerol-3-phosphate acyltransferases; Manually curated.
     
 0.675
SEB83227.1
Hypothetical protein.
  
     0.646
SEC22584.1
TLP18.3, Psb32 and MOLO-1 founding protein of phosphatase.
 
  
 0.643
SEB32116.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 
 0.624
SEC07777.1
Reductase C-terminal.
  
 
 0.624
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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