STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB70211.1MinD-like ATPase involved in chromosome partitioning or flagellar assembly. (570 aa)    
Predicted Functional Partners:
SEB70243.1
Type VII secretion integral membrane protein EccD.
 
  
 0.966
SEB70317.1
Type VII secretion protein EccE.
 
     0.914
SEB70283.1
Membrane-anchored mycosin MYCP.
 
    0.881
SEB69898.1
Hypothetical protein.
 
     0.721
SEC52044.1
Cna protein B-type domain-containing protein.
  
     0.720
SEC45476.1
Hypothetical protein.
  
     0.717
SEC05974.1
Hypothetical protein.
  
     0.711
SEB69963.1
Type VII secretion protein EccB.
 
  
 0.701
SED30957.1
Type VII secretion integral membrane protein EccD.
  
     0.699
SEB93343.1
Hypothetical protein.
  
   
 0.696
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.