Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB91615.1 | SEB91854.1 | SAMN04489793_1093 | SAMN04489793_1099 | DNA excision repair protein ERCC-3. | Helicase conserved C-terminal domain-containing protein. | 0.815 |
SEB91615.1 | SED05112.1 | SAMN04489793_1093 | SAMN04489793_3827 | DNA excision repair protein ERCC-3. | Hypothetical protein. | 0.454 |
SEB91854.1 | SEB91615.1 | SAMN04489793_1099 | SAMN04489793_1093 | Helicase conserved C-terminal domain-containing protein. | DNA excision repair protein ERCC-3. | 0.815 |
SEB91854.1 | SEB91885.1 | SAMN04489793_1099 | SAMN04489793_1100 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.685 |
SEB91854.1 | SEC12284.1 | SAMN04489793_1099 | SAMN04489793_1583 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.551 |
SEB91854.1 | SEC53016.1 | SAMN04489793_1099 | SAMN04489793_2526 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.558 |
SEB91854.1 | SEC55388.1 | SAMN04489793_1099 | SAMN04489793_2584 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.589 |
SEB91854.1 | SEC56615.1 | SAMN04489793_1099 | SAMN04489793_2614 | Helicase conserved C-terminal domain-containing protein. | Proteasome accessory factor A. | 0.578 |
SEB91854.1 | SED05112.1 | SAMN04489793_1099 | SAMN04489793_3827 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.550 |
SEB91854.1 | SED22201.1 | SAMN04489793_1099 | SAMN04489793_4340 | Helicase conserved C-terminal domain-containing protein. | Superfamily I DNA or RNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.553 |
SEB91854.1 | SED23789.1 | SAMN04489793_1099 | SAMN04489793_4388 | Helicase conserved C-terminal domain-containing protein. | Hypothetical protein. | 0.529 |
SEB91854.1 | moaC | SAMN04489793_1099 | SAMN04489793_1101 | Helicase conserved C-terminal domain-containing protein. | Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.658 |
SEB91885.1 | SEB91854.1 | SAMN04489793_1100 | SAMN04489793_1099 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.685 |
SEB91885.1 | moaC | SAMN04489793_1100 | SAMN04489793_1101 | Hypothetical protein. | Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.837 |
SEC12284.1 | SEB91854.1 | SAMN04489793_1583 | SAMN04489793_1099 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.551 |
SEC53016.1 | SEB91854.1 | SAMN04489793_2526 | SAMN04489793_1099 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.558 |
SEC53016.1 | SEC55388.1 | SAMN04489793_2526 | SAMN04489793_2584 | Hypothetical protein. | Hypothetical protein. | 0.406 |
SEC53016.1 | SED05112.1 | SAMN04489793_2526 | SAMN04489793_3827 | Hypothetical protein. | Hypothetical protein. | 0.486 |
SEC53016.1 | SED23789.1 | SAMN04489793_2526 | SAMN04489793_4388 | Hypothetical protein. | Hypothetical protein. | 0.651 |
SEC55388.1 | SEB91854.1 | SAMN04489793_2584 | SAMN04489793_1099 | Hypothetical protein. | Helicase conserved C-terminal domain-containing protein. | 0.589 |
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