STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC12690.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
SEC12652.1
Predicted phosphoesterase.
 
     0.953
SEC12614.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
       0.783
SEC12486.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.734
SEC12534.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
   
 0.711
SEC12572.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.686
SEC81095.1
Hypothetical protein.
 
     0.641
SEB66168.1
Hypothetical protein.
  
     0.623
SEB66135.1
Hypothetical protein.
  
     0.609
SED61218.1
Hypothetical protein.
  
 
   0.573
SED60284.1
Mannosyltransferase (PIG-V).
  
     0.569
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.