STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC13686.1HNH endonuclease. (534 aa)    
Predicted Functional Partners:
SED06973.1
Protein of unknown function.
  
     0.754
SEB82585.1
Protein of unknown function.
  
     0.725
SED11084.1
Protein of unknown function.
  
     0.721
SEC86312.1
Protein of unknown function.
  
     0.719
SED30312.1
Protein of unknown function.
  
  
 0.718
SEC14679.1
ATP synthase I chain.
  
     0.619
SEB91576.1
HNH endonuclease.
  
  
 0.610
SEC23041.1
Hypothetical protein.
  
     0.610
SEC13652.1
Hypothetical protein.
       0.570
SEB72353.1
Putative ABC transport system ATP-binding protein.
  
 
 0.549
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.