STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC71062.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. (399 aa)    
Predicted Functional Partners:
SEC71104.1
Cytochrome P450.
 
  
 0.944
SEC71137.1
Ferredoxin, 2Fe-2S.
 
  
 0.944
SEC20936.1
Sulfite reductase [NADPH] flavoprotein, alpha-component; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.842
SEB32132.1
Ferredoxin, 2Fe-2S.
 
  
 0.827
SEC71026.1
Transglutaminase-like superfamily protein.
       0.777
SEB32124.1
Cytochrome P450.
 
  
 0.762
SEC20811.1
Nitrite reductase (NADH) small subunit.
 
 
 0.691
SEC70986.1
Butirosin biosynthesis protein H, N-terminal.
 
     0.687
SEC71176.1
Arabinose-binding domain of AraC transcription regulator, N-term.
 
     0.640
SED19069.1
Cytochrome P450.
 
  
 0.639
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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