STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC93720.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
SEC22957.1
Protein of unknown function.
  
     0.721
SEB86606.1
Hypothetical protein.
  
     0.703
SED27304.1
Hypothetical protein.
  
     0.683
SEB62159.1
FHA domain-containing protein.
  
     0.672
SEC11190.1
DivIVA domain-containing protein.
  
     0.663
SEC22188.1
Hypothetical protein.
  
     0.660
SEC34561.1
Protein of unknown function.
  
     0.658
SEC57227.1
Protein of unknown function.
  
     0.654
SEC25256.1
Protein of unknown function.
  
     0.650
SEB91885.1
Hypothetical protein.
  
     0.649
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.