STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED31141.1WXG100 family type VII secretion target; Belongs to the WXG100 family. (99 aa)    
Predicted Functional Partners:
SED31110.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
 
 0.998
SEB29580.1
FtsK/SpoIIIE family protein.
 
 
 0.830
SEB69993.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
 
 0.819
SEB65448.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.753
SEC65539.1
ATPase family associated with various cellular activities (AAA).
  
 
 0.753
SEC68409.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.753
SEC73267.1
FtsK/SpoIIIE family protein.
  
 
 0.753
SED30913.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.753
SED31180.1
EspG family protein.
     
 0.697
SEB70243.1
Type VII secretion integral membrane protein EccD.
 
   
 0.685
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.