STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED51730.1Uncharacterized OB-fold protein, contains Zn-ribbon domain. (327 aa)    
Predicted Functional Partners:
SED51784.1
MaoC like domain-containing protein.
 
 0.999
SED51847.1
Acetyl-CoA acetyltransferase.
 
 
 0.980
SED51662.1
Hypothetical protein.
 
  
 0.977
SED49024.1
acetyl-CoA C-acetyltransferase.
 
 
 0.925
SED89996.1
acetyl-CoA C-acetyltransferase.
 
 
 0.925
SED48957.1
Acetyl-CoA acetyltransferase.
 
 
 0.906
SED90024.1
Acetyl-CoA acetyltransferase.
 
 
 0.906
SED51540.1
SnoaL-like domain-containing protein.
 
     0.889
SED51912.1
Acyl-coenzyme A thioesterase PaaI, contains HGG motif.
 
     0.812
SED49489.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.802
Your Current Organism:
Tsukamurella tyrosinosolvens
NCBI taxonomy Id: 57704
Other names: CCUG 38499, CIP 106771, DSM 44234, JCM 10112, JCM 15482 [[Tsukamurella carboxydivorans]], KCCM 42885 [[Tsukamurella carboxydivorans]], NCTC 13231, T. tyrosinosolvens, Tsukamurella carboxydivorans, Tsukamurella carboxydivorans Park et al. 2009, Tsukamurella sp. MH1, Tsukamurella sp. Y2, Tsukamurella tyrosinisolvens, strain Y2 [[Tsukamurella carboxydivorans]]
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