Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG09400.1 | OJG13212.1 | RU94_GL001232 | RU94_GL001510 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. | 0.488 |
OJG13194.1 | OJG13196.1 | RU94_GL001492 | RU94_GL001494 | Diacylglycerol kinase. | HD protein. | 0.845 |
OJG13194.1 | OJG13197.1 | RU94_GL001492 | RU94_GL001495 | Diacylglycerol kinase. | Hypothetical protein. | 0.829 |
OJG13194.1 | OJG13198.1 | RU94_GL001492 | RU94_GL001496 | Diacylglycerol kinase. | glutamyl-tRNA(Gln) amidotransferase subunit E. | 0.721 |
OJG13194.1 | OJG13211.1 | RU94_GL001492 | RU94_GL001509 | Diacylglycerol kinase. | Fur family transcriptional regulator; Belongs to the Fur family. | 0.599 |
OJG13194.1 | OJG13212.1 | RU94_GL001492 | RU94_GL001510 | Diacylglycerol kinase. | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. | 0.506 |
OJG13194.1 | era | RU94_GL001492 | RU94_GL001491 | Diacylglycerol kinase. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.904 |
OJG13194.1 | rpsU | RU94_GL001492 | RU94_GL001497 | Diacylglycerol kinase. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.697 |
OJG13194.1 | ybeY | RU94_GL001492 | RU94_GL001493 | Diacylglycerol kinase. | Metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.944 |
OJG13196.1 | OJG13194.1 | RU94_GL001494 | RU94_GL001492 | HD protein. | Diacylglycerol kinase. | 0.845 |
OJG13196.1 | OJG13197.1 | RU94_GL001494 | RU94_GL001495 | HD protein. | Hypothetical protein. | 0.840 |
OJG13196.1 | OJG13198.1 | RU94_GL001494 | RU94_GL001496 | HD protein. | glutamyl-tRNA(Gln) amidotransferase subunit E. | 0.739 |
OJG13196.1 | OJG13211.1 | RU94_GL001494 | RU94_GL001509 | HD protein. | Fur family transcriptional regulator; Belongs to the Fur family. | 0.672 |
OJG13196.1 | OJG13212.1 | RU94_GL001494 | RU94_GL001510 | HD protein. | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. | 0.571 |
OJG13196.1 | era | RU94_GL001494 | RU94_GL001491 | HD protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.814 |
OJG13196.1 | rpsU | RU94_GL001494 | RU94_GL001497 | HD protein. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.710 |
OJG13196.1 | ybeY | RU94_GL001494 | RU94_GL001493 | HD protein. | Metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.903 |
OJG13197.1 | OJG13194.1 | RU94_GL001495 | RU94_GL001492 | Hypothetical protein. | Diacylglycerol kinase. | 0.829 |
OJG13197.1 | OJG13196.1 | RU94_GL001495 | RU94_GL001494 | Hypothetical protein. | HD protein. | 0.840 |
OJG13197.1 | OJG13198.1 | RU94_GL001495 | RU94_GL001496 | Hypothetical protein. | glutamyl-tRNA(Gln) amidotransferase subunit E. | 0.757 |
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