STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000974805_00892Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000974805_00893
Unannotated protein.
 
  
 0.978
GCA_000974805_00894
Unannotated protein.
       0.679
GCA_000974805_00895
Unannotated protein.
       0.673
GCA_000974805_00554
Unannotated protein.
  
    0.625
GCA_000974805_00896
Unannotated protein.
  
    0.609
GCA_000974805_00897
Unannotated protein.
       0.570
GCA_000974805_00891
Unannotated protein.
       0.569
GCA_000974805_02123
Unannotated protein.
 
    0.544
GCA_000974805_00898
Unannotated protein.
       0.504
GCA_000974805_01392
Unannotated protein.
 
   
 0.476
Your Current Organism:
Demequina salsinemoris
NCBI taxonomy Id: 577470
Other names: D. salsinemoris, DSM 22060, Demequina salsinemoris Matsumoto et al. 2010, Demequina sp. KV-810, Demequina sp. KV-811, Demequina sp. KV-816, NBRC 105323, strain KV-810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.