STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000974805_01348Unannotated protein. (299 aa)    
Predicted Functional Partners:
GCA_000974805_01349
Unannotated protein.
 
 0.999
GCA_000974805_01347
Unannotated protein.
 
  
 0.993
GCA_000974805_01350
Unannotated protein.
 
 
 0.985
GCA_000974805_01346
Unannotated protein.
 
  
 0.971
GCA_000974805_01604
Unannotated protein.
   
  0.944
GCA_000974805_01353
Unannotated protein.
 
     0.914
GCA_000974805_01352
Unannotated protein.
 
     0.911
GCA_000974805_02451
Unannotated protein.
   
 0.898
GCA_000974805_02450
Unannotated protein.
   
 0.853
GCA_000974805_02649
Unannotated protein.
    
  0.794
Your Current Organism:
Demequina salsinemoris
NCBI taxonomy Id: 577470
Other names: D. salsinemoris, DSM 22060, Demequina salsinemoris Matsumoto et al. 2010, Demequina sp. KV-810, Demequina sp. KV-811, Demequina sp. KV-816, NBRC 105323, strain KV-810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.