STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000974805_01398Unannotated protein. (452 aa)    
Predicted Functional Partners:
GCA_000974805_01399
Unannotated protein.
 
     0.923
GCA_000974805_01400
Unannotated protein.
 
     0.923
GCA_000974805_01405
Unannotated protein.
 
     0.899
GCA_000974805_01402
Unannotated protein.
 
     0.881
GCA_000974805_01403
Unannotated protein.
 
     0.848
GCA_000974805_01404
Unannotated protein.
 
     0.834
GCA_000974805_01396
Unannotated protein.
       0.698
GCA_000974805_01397
Unannotated protein.
       0.698
GCA_000974805_01395
Unannotated protein.
       0.493
GCA_000974805_01401
Unannotated protein.
 
    
0.479
Your Current Organism:
Demequina salsinemoris
NCBI taxonomy Id: 577470
Other names: D. salsinemoris, DSM 22060, Demequina salsinemoris Matsumoto et al. 2010, Demequina sp. KV-810, Demequina sp. KV-811, Demequina sp. KV-816, NBRC 105323, strain KV-810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.