STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000974805_02381Unannotated protein. (136 aa)    
Predicted Functional Partners:
GCA_000974805_02383
Unannotated protein.
  
  
 0.978
GCA_000974805_02382
Unannotated protein.
  
 
 0.973
GCA_000974805_02384
Unannotated protein.
  
 
 0.919
GCA_000974805_01646
Unannotated protein.
  
 
 0.886
GCA_000974805_02171
Unannotated protein.
    
 0.863
GCA_000974805_01732
Unannotated protein.
    
 0.852
GCA_000974805_00208
Unannotated protein.
  
 
  0.789
GCA_000974805_01870
Unannotated protein.
  
 
 0.782
GCA_000974805_01998
Unannotated protein.
  
 
   0.782
GCA_000974805_00786
Unannotated protein.
    
 0.772
Your Current Organism:
Demequina salsinemoris
NCBI taxonomy Id: 577470
Other names: D. salsinemoris, DSM 22060, Demequina salsinemoris Matsumoto et al. 2010, Demequina sp. KV-810, Demequina sp. KV-811, Demequina sp. KV-816, NBRC 105323, strain KV-810
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.