STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000974805_02778Unannotated protein. (437 aa)    
Predicted Functional Partners:
GCA_000974805_02779
Unannotated protein.
 
   
0.960
GCA_000974805_02653
Unannotated protein.
  
 
 0.832
GCA_000974805_02777
Unannotated protein.
  
    0.583
GCA_000974805_01651
Unannotated protein.
  
    0.443
GCA_000974805_01650
Unannotated protein.
  
    0.402
GCA_000974805_02780
Unannotated protein.
       0.401
Your Current Organism:
Demequina salsinemoris
NCBI taxonomy Id: 577470
Other names: D. salsinemoris, DSM 22060, Demequina salsinemoris Matsumoto et al. 2010, Demequina sp. KV-810, Demequina sp. KV-811, Demequina sp. KV-816, NBRC 105323, strain KV-810
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.